HL_3J7P_057

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GACAGAAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_25023.1

Basepair signature

cWW-cWH-R-R-R-R

Number of instances in this motif group

7

Unit IDs

3J7P|1|5|G|4250
3J7P|1|5|A|4251
3J7P|1|5|C|4252
3J7P|1|5|A|4253
3J7P|1|5|G|4254
3J7P|1|5|A|4255
3J7P|1|5|A|4256
3J7P|1|5|A|4257
3J7P|1|5|C|4258

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain J

Ribosomal protein uL5