HL_3J7P_061

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGUUCAUAG

Length

9 nucleotides

Bulged bases

3J7P|1|5|U|4419

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_05568.1

Basepair signature

cWW-tSH-R-R-R-R-R

Number of instances in this motif group

14

Unit IDs

3J7P|1|5|C|4417
3J7P|1|5|G|4418
3J7P|1|5|U|4419
3J7P|1|5|U|4420
3J7P|1|5|C|4421
3J7P|1|5|A|4422
3J7P|1|5|U|4423
3J7P|1|5|A|4424
3J7P|1|5|G|4425

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 4

Eukaryotic elongation factor 2

Chain H

Ribosomal protein uL6

Chain I

Ribosomal protein uL16

Chain m

Ribosomal protein eL40