HL_3J7P_063

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAUUGUUCACC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_95765.1

Basepair signature

cWW-R-R-R-R-R-R-R-R

Number of instances in this motif group

11

Unit IDs

3J7P|1|5|G|4495
3J7P|1|5|A|4496
3J7P|1|5|U|4497
3J7P|1|5|U|4498
3J7P|1|5|G|4499
3J7P|1|5|U|4500
3J7P|1|5|U|4501
3J7P|1|5|C|4502
3J7P|1|5|A|4503
3J7P|1|5|C|4504
3J7P|1|5|C|4505

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

Ribosomal protein uL3

Chain V

Ribosomal protein uL14