HL_3J7P_066

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCUGAGGAGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_12776.1

Basepair signature

cWW-R-R-R-R-R-R-R

Number of instances in this motif group

7

Unit IDs

3J7P|1|5|G|4644
3J7P|1|5|C|4645
3J7P|1|5|U|4646
3J7P|1|5|G|4647
3J7P|1|5|A|4648
3J7P|1|5|G|4649
3J7P|1|5|G|4650
3J7P|1|5|A|4651
3J7P|1|5|G|4652
3J7P|1|5|C|4653

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

Ribosomal protein eL19

Chain U

Ribosomal protein eL22

Chain d

Ribosomal protein eL31