HL_3J7P_067

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

3J7P|1|5|G|4694, 3J7P|1|5|C|4698

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69076.1

Basepair signature

cWW-tSH-cWH-tSH-tWH-tHW-tHW-tSW

Number of instances in this motif group

12

Unit IDs

3J7P|1|5|C|4688
3J7P|1|5|U|4689
3J7P|1|5|G|4690
3J7P|1|5|A|4691
3J7P|1|5|A|4692
3J7P|1|5|C|4693
3J7P|1|5|G|4694
3J7P|1|5|C|4695
3J7P|1|5|C|4696
3J7P|1|5|U|4697
3J7P|1|5|C|4698
3J7P|1|5|U|4699
3J7P|1|5|A|4700
3J7P|1|5|A|4701
3J7P|1|5|G|4702

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain H

Ribosomal protein uL6

Chain O

Ribosomal protein uL13

Chain m

Ribosomal protein eL40