HL_3J7P_074
3D structure
- PDB id
- 3J7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUGAAUUGCAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 3J7P|1|8|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39436.1
- Basepair signature
- cWW-cWW-tSH-tHS-R-R-R-R-R-R-cWW-R-R-R-R-R
- Number of instances in this motif group
- 2
Unit IDs
3J7P|1|8|G|68
3J7P|1|8|U|69
3J7P|1|8|G|70
3J7P|1|8|A|71
3J7P|1|8|A|72
3J7P|1|8|U|73
3J7P|1|8|U|74
3J7P|1|8|G|75
3J7P|1|8|C|76
3J7P|1|8|A|77
3J7P|1|8|G|78
3J7P|1|8|G|79
3J7P|1|8|A|80
3J7P|1|8|C|81
3J7P|1|8|A|82
3J7P|1|8|C|83
3J7P|1|8|A|84
3J7P|1|8|U|85
3J7P|1|8|U|86
3J7P|1|8|G|87
3J7P|1|8|A|88
3J7P|1|8|U|89
3J7P|1|8|C|90
Current chains
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain Y
- Ribosomal protein uL24
- Chain h
- Ribosomal protein uL29
- Chain j
- Ribosomal protein eL37
- Chain l
- Ribosomal protein eL39
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