Motif HL_39436.1 Version HL_39436.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 1-22 | 2-21 | 3-20 | 4-19 | 5-12 | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3J7P_074 | 3J7P | 0.0000 | 1 | 8 | 5.8S rRNA | G | 68 | U | 69 | G | 70 | A | 71 | A | 72 | U | 73 | U | 74 | G | 75 | C | 76 | A | 77 | G | 78 | G | 79 | A | 80 | C | 81 | A | 82 | C | 83 | A | 84 | U | 85 | G | 87 | A | 88 | U | 89 | C | 90 | cWW | ncwW | tSH | tHS | cWW |
| 2 | HL_5AJ0_076 | 5AJ0 | 0.6292 | 1 | A3 | 5.8S rRNA | G | 68 | U | 69 | G | 70 | A | 71 | A | 72 | U | 73 | U | 74 | G | 75 | C | 76 | A | 77 | G | 78 | G | 79 | A | 80 | C | 81 | A | 82 | C | 83 | A | 84 | U | 85 | G | 87 | A | 88 | U | 89 | C | 90 | cWW | cwW | tSH | tHS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUGAAUUGCAGGACACAUUGAUC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGAAUUGCAGGACACAUUGAU | 2 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-tSH-tHS-R-R-R-R-R-R-cWW-R-R-R-R-R
- Heat map statistics
- Min 0.63 | Avg 0.31 | Max 0.63
Coloring options: