3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GUUAAUUC
Length
8 nucleotides
Bulged bases
3J7P|1|S2|U|1371
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_06138.1
Basepair signature
cWW-cWW-R-R-R
Number of instances in this motif group
18

Unit IDs

3J7P|1|S2|G|1366
3J7P|1|S2|U|1367
3J7P|1|S2|U|1368
3J7P|1|S2|A|1369
3J7P|1|S2|A|1370
3J7P|1|S2|U|1371
3J7P|1|S2|U|1372
3J7P|1|S2|C|1373

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain SR
Ribosomal protein eS17

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.7279 s