3D structure

PDB id
3J7Y (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the large ribosomal subunit from human mitochondria
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
AGCAUCACCAGUAUU
Length
15 nucleotides
Bulged bases
3J7Y|1|A|C|2523, 3J7Y|1|A|A|2527, 3J7Y|1|A|U|2531
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_68897.1
Basepair signature
cWW-tHH-tSS-tWW-R-R-R-R-R
Number of instances in this motif group
2

Unit IDs

3J7Y|1|A|A|2518
3J7Y|1|A|G|2519
3J7Y|1|A|C|2520
3J7Y|1|A|A|2521
3J7Y|1|A|U|2522
3J7Y|1|A|C|2523
3J7Y|1|A|A|2524
3J7Y|1|A|C|2525
3J7Y|1|A|C|2526
3J7Y|1|A|A|2527
3J7Y|1|A|G|2528
3J7Y|1|A|U|2529
3J7Y|1|A|A|2530
3J7Y|1|A|U|2531
3J7Y|1|A|U|2532

Current chains

Chain A
16S rRNA

Nearby chains

Chain 5
mL37
Chain D
uL2

Coloring options:

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