HL_3J7Y_042
3D structure
- PDB id
- 3J7Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large ribosomal subunit from human mitochondria
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- ACUUACACU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J7Y_042 not in the Motif Atlas
- Geometric match to HL_5T83_002
- Geometric discrepancy: 0.2344
- The information below is about HL_5T83_002
- Detailed Annotation
- Anticodon loop related
- Broad Annotation
- Guanidine riboswitch aptamer P2 hairpin
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
3J7Y|1|B|A|1630
3J7Y|1|B|C|1631
3J7Y|1|B|U|1632
3J7Y|1|B|U|1633
3J7Y|1|B|A|1634
3J7Y|1|B|C|1635
3J7Y|1|B|A|1636
3J7Y|1|B|C|1637
3J7Y|1|B|U|1638
Current chains
- Chain B
- mt-tRNAVal
Nearby chains
- Chain 6
- mL38
- Chain 8
- mL40
- Chain P
- uL18
- Chain W
- bL27
- Chain f
- mL48
- Chain t
- unknown protein
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