HL_3J8G_031

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J8G_031 not in the Motif Atlas

Homologous match to HL_6PRV_002

Geometric discrepancy: 0.3409

The information below is about HL_6PRV_002

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.3

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

3J8G|1|B|C|1092
3J8G|1|B|G|1093
3J8G|1|B|U|1094
3J8G|1|B|A|1095
3J8G|1|B|A|1096
3J8G|1|B|U|1097
3J8G|1|B|A|1098
3J8G|1|B|G|1099

Current chains

Chain B

23S rRNA

Nearby chains

Chain 8

50S ribosomal protein L36

Chain I

50S ribosomal protein L11