3D structure

PDB id
3J8G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
5 Å

Loop

Sequence
UGUGAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_3J8G_033 not in the Motif Atlas
Homologous match to HL_5J7L_164
Geometric discrepancy: 0.1491
The information below is about HL_5J7L_164
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

3J8G|1|B|U|1222
3J8G|1|B|G|1223
3J8G|1|B|U|1224
3J8G|1|B|G|1225
3J8G|1|B|A|1226
3J8G|1|B|G|1227

Current chains

Chain B
23S rRNA

Nearby chains

Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21

Coloring options:


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