HL_3J8G_037

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

3J8G|1|B|U|1391, 3J8G|1|B|U|1396, 3J8G|1|B|U|1397

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J8G_037 not in the Motif Atlas

Homologous match to HL_4WF9_035

Geometric discrepancy: 0.3731

The information below is about HL_4WF9_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

14

Unit IDs

3J8G|1|B|G|1389
3J8G|1|B|U|1390
3J8G|1|B|U|1391
3J8G|1|B|A|1392
3J8G|1|B|A|1393
3J8G|1|B|U|1394
3J8G|1|B|A|1395
3J8G|1|B|U|1396
3J8G|1|B|U|1397
3J8G|1|B|C|1398

Current chains

Chain B

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23