HL_3J8G_051

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J8G_051 not in the Motif Atlas

Geometric match to HL_2ZNI_001

Geometric discrepancy: 0.2689

The information below is about HL_2ZNI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

3J8G|1|B|G|1949
3J8G|1|B|G|1950
3J8G|1|B|U|1951
3J8G|1|B|A|1952
3J8G|1|B|A|1953
3J8G|1|B|G|1954
3J8G|1|B|U|1955
3J8G|1|B|U|1956
3J8G|1|B|C|1957

Current chains

Chain B

23S rRNA

Nearby chains

Chain K

50S ribosomal protein L14