HL_3J92_025
3D structure
- PDB id
- 3J92 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure and assembly pathway of the ribosome quality control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCGAAAGAC
- Length
- 9 nucleotides
- Bulged bases
- 3J92|1|5|A|1630
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J92_025 not in the Motif Atlas
- Homologous match to HL_5TBW_021
- Geometric discrepancy: 0.1121
- The information below is about HL_5TBW_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56443.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
3J92|1|5|G|1627
3J92|1|5|C|1628
3J92|1|5|G|1629
3J92|1|5|A|1630
3J92|1|5|A|1631
3J92|1|5|A|1632
3J92|1|5|G|1633
3J92|1|5|A|1634
3J92|1|5|C|1635
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 1
- nascent chain
- Chain A
- uL2
- Chain N
- eL15
- Chain j
- eL37
Coloring options: