HL_3J9M_005
3D structure
- PDB id
- 3J9M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome (class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GACUAACCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J9M_005 not in the Motif Atlas
- Geometric match to HL_4V88_198
- Geometric discrepancy: 0.3544
- The information below is about HL_4V88_198
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
3J9M|1|A|G|1831
3J9M|1|A|A|1832
3J9M|1|A|C|1833
3J9M|1|A|U|1834
3J9M|1|A|A|1835
3J9M|1|A|A|1836
3J9M|1|A|C|1837
3J9M|1|A|C|1838
3J9M|1|A|C|1839
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain K
- uL13m
- Chain R
- bL20m
- Chain S
- bL21m
- Chain T
- uL22m
- Chain a
- mL42
- Chain b
- mL43
Coloring options: