HL_3J9M_050

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

3J9M|1|AA|U|1081

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56205.1

Basepair signature

cWW-R-tSH-R-R-R-R

Number of instances in this motif group

26

Unit IDs

3J9M|1|AA|G|1074
3J9M|1|AA|A|1075
3J9M|1|AA|U|1076
3J9M|1|AA|U|1077
3J9M|1|AA|A|1078
3J9M|1|AA|G|1079
3J9M|1|AA|A|1080
3J9M|1|AA|U|1081
3J9M|1|AA|A|1082
3J9M|1|AA|C|1083
3J9M|1|AA|C|1084

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain AI

uS11m

Chain AQ

bS21m