HL_3J9M_054

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGAUGAA

Length

7 nucleotides

Bulged bases

3J9M|1|AA|A|1283, 3J9M|1|AA|U|1284

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_14932.1

Basepair signature

cWW-tSH-R

Number of instances in this motif group

6

Unit IDs

3J9M|1|AA|U|1281
3J9M|1|AA|G|1282
3J9M|1|AA|A|1283
3J9M|1|AA|U|1284
3J9M|1|AA|G|1285
3J9M|1|AA|A|1286
3J9M|1|AA|A|1287

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AB

uS2m

Chain AD

uS5m

Chain AE

bS6m

Chain AS

mS23