HL_3J9W_011

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UUUCGG

Length

6 nucleotides

Bulged bases

3J9W|1|AA|U|429

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48112.1

Basepair signature

cWW-tSW-R

Number of instances in this motif group

59

Unit IDs

3J9W|1|AA|U|427
3J9W|1|AA|U|428
3J9W|1|AA|U|429
3J9W|1|AA|C|430
3J9W|1|AA|G|431
3J9W|1|AA|G|432

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AC

30S ribosomal protein uS3