HL_3J9W_040

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGAAUUCAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79069.1

Basepair signature

cWW-tSH-tHW-tHW-R-R-R

Number of instances in this motif group

3

Unit IDs

3J9W|1|BA|U|159
3J9W|1|BA|G|160
3J9W|1|BA|A|161
3J9W|1|BA|A|162
3J9W|1|BA|U|163
3J9W|1|BA|U|164
3J9W|1|BA|C|165
3J9W|1|BA|A|166
3J9W|1|BA|U|167
3J9W|1|BA|A|168
3J9W|1|BA|G|169

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B0

50S ribosomal protein bL28