HL_3J9W_047

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUAACAGCC

Length

9 nucleotides

Bulged bases

3J9W|1|BA|A|373

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69480.1

Basepair signature

cWW-R-R-tWH

Number of instances in this motif group

18

Unit IDs

3J9W|1|BA|G|371
3J9W|1|BA|U|372
3J9W|1|BA|A|373
3J9W|1|BA|A|374
3J9W|1|BA|C|375
3J9W|1|BA|A|376
3J9W|1|BA|G|377
3J9W|1|BA|C|378
3J9W|1|BA|C|379

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BF

50S ribosomal protein uL4

Chain BX

50S ribosomal protein uL24