HL_3J9W_090

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

3J9W|1|BA|A|2297, 3J9W|1|BA|C|2304

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38117.1

Basepair signature

cWW-tSH-tHH-tWW-R-R-R

Number of instances in this motif group

15

Unit IDs

3J9W|1|BA|C|2293
3J9W|1|BA|U|2294
3J9W|1|BA|A|2295
3J9W|1|BA|A|2296
3J9W|1|BA|A|2297
3J9W|1|BA|A|2298
3J9W|1|BA|G|2299
3J9W|1|BA|G|2300
3J9W|1|BA|U|2301
3J9W|1|BA|A|2302
3J9W|1|BA|A|2303
3J9W|1|BA|C|2304
3J9W|1|BA|G|2305

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BP

50S ribosomal protein uL16

Chain BZ

50S ribosomal protein bL27