HL_3J9W_104

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

AAAGAUGAU

Length

9 nucleotides

Bulged bases

3J9W|1|BA|A|2845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_57089.1

Basepair signature

cWW-cSW-R-R-R-R

Number of instances in this motif group

13

Unit IDs

3J9W|1|BA|A|2844
3J9W|1|BA|A|2845
3J9W|1|BA|A|2846
3J9W|1|BA|G|2847
3J9W|1|BA|A|2848
3J9W|1|BA|U|2849
3J9W|1|BA|G|2850
3J9W|1|BA|A|2851
3J9W|1|BA|U|2852

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein uL3

Chain BQ

50S ribosomal protein bL17