HL_3J9Z_023

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

3J9Z|1|LA|A|781

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J9Z_023 not in the Motif Atlas

Homologous match to HL_9DFE_022

Geometric discrepancy: 0.1779

The information below is about HL_9DFE_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

3J9Z|1|LA|U|779
3J9Z|1|LA|G|780
3J9Z|1|LA|A|781
3J9Z|1|LA|A|782
3J9Z|1|LA|A|783
3J9Z|1|LA|G|784
3J9Z|1|LA|G|785

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LN

50S ribosomal protein L2