HL_3J9Z_031

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J9Z_031 not in the Motif Atlas

Homologous match to HL_5J7L_164

Geometric discrepancy: 0.1356

The information below is about HL_5J7L_164

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

3J9Z|1|LA|U|1222
3J9Z|1|LA|G|1223
3J9Z|1|LA|U|1224
3J9Z|1|LA|G|1225
3J9Z|1|LA|A|1226
3J9Z|1|LA|G|1227

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LH

50S ribosomal protein L15

Chain LO

50S ribosomal protein L20

Chain LP

50S ribosomal protein L21