HL_3J9Z_037

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCAAAUC

Length

7 nucleotides

Bulged bases

3J9Z|1|LA|U|1497

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J9Z_037 not in the Motif Atlas

Homologous match to HL_7RQB_038

Geometric discrepancy: 0.2648

The information below is about HL_7RQB_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46680.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

27

Unit IDs

3J9Z|1|LA|G|1492
3J9Z|1|LA|C|1493
3J9Z|1|LA|A|1494
3J9Z|1|LA|A|1495
3J9Z|1|LA|A|1496
3J9Z|1|LA|U|1497
3J9Z|1|LA|C|1498

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LN

50S ribosomal protein L2