HL_3J9Z_058

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J9Z_058 not in the Motif Atlas

Homologous match to HL_5J7L_191

Geometric discrepancy: 0.1249

The information below is about HL_5J7L_191

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

3J9Z|1|LA|C|2374
3J9Z|1|LA|G|2375
3J9Z|1|LA|A|2376
3J9Z|1|LA|A|2377
3J9Z|1|LA|A|2378
3J9Z|1|LA|G|2379

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain L2

50S ribosomal protein L33

Chain LK

50S ribosomal protein L18