HL_3J9Z_082

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J9Z_082 not in the Motif Atlas

Geometric match to HL_5HR7_005

Geometric discrepancy: 0.3416

The information below is about HL_5HR7_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50006.2

Basepair signature

cWW-F-F

Number of instances in this motif group

5

Unit IDs

3J9Z|1|SA|C|207
3J9Z|1|SA|U|208
3J9Z|1|SA|U|209
3J9Z|1|SA|C|210
3J9Z|1|SA|G|211
3J9Z|1|SA|G|212

Current chains

Chain SA

16S ribosomal RNA

Nearby chains