HL_3J9Z_089

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

3J9Z|1|SA|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J9Z_089 not in the Motif Atlas

Geometric match to HL_5J7L_014

Geometric discrepancy: 0.3611

The information below is about HL_5J7L_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_10453.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

3J9Z|1|SA|G|462
3J9Z|1|SA|U|463
3J9Z|1|SA|U|464
3J9Z|1|SA|A|465
3J9Z|1|SA|A|466
3J9Z|1|SA|U|467
3J9Z|1|SA|A|468
3J9Z|1|SA|C|469
3J9Z|1|SA|C|470

Current chains

Chain SA

16S ribosomal RNA

Nearby chains