HL_3J9Z_091

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCUCAAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J9Z_091 not in the Motif Atlas

Homologous match to HL_4LFB_014

Geometric discrepancy: 0.1162

The information below is about HL_4LFB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_10453.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

3J9Z|1|SA|G|617
3J9Z|1|SA|C|618
3J9Z|1|SA|U|619
3J9Z|1|SA|C|620
3J9Z|1|SA|A|621
3J9Z|1|SA|A|622
3J9Z|1|SA|C|623

Current chains

Chain SA

16S ribosomal RNA

Nearby chains

Chain SD

30S ribosomal protein S4

Chain SP

30S ribosomal protein S16