HL_3J9Z_094
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 3J9Z|1|SA|A|790, 3J9Z|1|SA|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J9Z_094 not in the Motif Atlas
- Homologous match to HL_4LFB_017
- Geometric discrepancy: 0.2661
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
3J9Z|1|SA|G|786
3J9Z|1|SA|A|787
3J9Z|1|SA|U|788
3J9Z|1|SA|U|789
3J9Z|1|SA|A|790
3J9Z|1|SA|G|791
3J9Z|1|SA|A|792
3J9Z|1|SA|U|793
3J9Z|1|SA|A|794
3J9Z|1|SA|C|795
3J9Z|1|SA|C|796
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain S1
- Elongation factor G
- Chain S6
- Transfer RNA; tRNA
- Chain S7
- Transfer RNA; tRNA
- Chain SK
- 30S ribosomal protein S11
- Chain SU
- 30S ribosomal protein S21
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