HL_3JA1_019

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JA1_019 not in the Motif Atlas

Homologous match to HL_5J7L_152

Geometric discrepancy: 0.1557

The information below is about HL_5J7L_152

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

3JA1|1|LA|G|629
3JA1|1|LA|G|630
3JA1|1|LA|A|631
3JA1|1|LA|A|632
3JA1|1|LA|A|633
3JA1|1|LA|C|634

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain L6

50S ribosomal protein L35

Chain LN

50S ribosomal protein L15