HL_3JA1_023

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

3JA1|1|LA|A|781, 3JA1|1|LA|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JA1_023 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.1766

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

3JA1|1|LA|U|779
3JA1|1|LA|G|780
3JA1|1|LA|A|781
3JA1|1|LA|A|782
3JA1|1|LA|A|783
3JA1|1|LA|G|784
3JA1|1|LA|G|785

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LD

50S ribosomal protein L2