HL_3JA1_031

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JA1_031 not in the Motif Atlas

Homologous match to HL_5J7L_164

Geometric discrepancy: 0.2449

The information below is about HL_5J7L_164

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

3JA1|1|LA|U|1222
3JA1|1|LA|G|1223
3JA1|1|LA|U|1224
3JA1|1|LA|G|1225
3JA1|1|LA|A|1226
3JA1|1|LA|G|1227

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LS

50S ribosomal protein L20

Chain LT

50S ribosomal protein L21