HL_3JA1_037

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCAAAUC

Length

7 nucleotides

Bulged bases

3JA1|1|LA|C|1493, 3JA1|1|LA|U|1497

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JA1_037 not in the Motif Atlas

Homologous match to HL_7RQB_038

Geometric discrepancy: 0.3422

The information below is about HL_7RQB_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46680.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

27

Unit IDs

3JA1|1|LA|G|1492
3JA1|1|LA|C|1493
3JA1|1|LA|A|1494
3JA1|1|LA|A|1495
3JA1|1|LA|A|1496
3JA1|1|LA|U|1497
3JA1|1|LA|C|1498

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LD

50S ribosomal protein L2