HL_3JA1_083

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JA1_083 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.3327

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

3JA1|1|SA|C|342
3JA1|1|SA|U|343
3JA1|1|SA|A|344
3JA1|1|SA|C|345
3JA1|1|SA|G|346
3JA1|1|SA|G|347

Current chains

Chain SA

16S ribosomal RNA

Nearby chains

Chain LM

50S ribosomal protein L14

Chain LR

50S ribosomal protein L19

Chain S3

Elongation factor G