HL_3JAG_034
3D structure
- PDB id
- 3JAG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- CAUGGAAGUCG
- Length
- 11 nucleotides
- Bulged bases
- 3JAG|1|5|A|1984
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JAG_034 not in the Motif Atlas
- Homologous match to HL_5TBW_027
- Geometric discrepancy: 0.4299
- The information below is about HL_5TBW_027
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19210.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
3JAG|1|5|C|1978
3JAG|1|5|A|1979
3JAG|1|5|U|1980
3JAG|1|5|G|1981
3JAG|1|5|G|1982
3JAG|1|5|A|1983
3JAG|1|5|A|1984
3JAG|1|5|G|1985
3JAG|1|5|U|1986
3JAG|1|5|C|1987
3JAG|1|5|G|1988
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain I
- uL16
- Chain ii
- eRF1
- Chain t
- uL11
Coloring options: