HL_3JAI_056
3D structure
- PDB id
- 3JAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- GUAACUAUGAC
- Length
- 11 nucleotides
- Bulged bases
- 3JAI|1|5|A|3760
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JAI_056 not in the Motif Atlas
- Homologous match to HL_8C3A_049
- Geometric discrepancy: 0.3197
- The information below is about HL_8C3A_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
3JAI|1|5|G|3757
3JAI|1|5|U|3758
3JAI|1|5|A|3759
3JAI|1|5|A|3760
3JAI|1|5|C|3761
3JAI|1|5|U|3762
3JAI|1|5|A|3763
3JAI|1|5|U|3764
3JAI|1|5|G|3765
3JAI|1|5|A|3766
3JAI|1|5|C|3767
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain 9
- Small subunit ribosomal RNA; SSU rRNA
- Chain ee
- eS30
- Chain hh
- mRNA
- Chain ii
- eRF1
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