HL_3JAI_089
3D structure
- PDB id
- 3JAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- GGUGACUC
- Length
- 8 nucleotides
- Bulged bases
- 3JAI|1|9|A|292, 3JAI|1|9|U|294
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JAI_089 not in the Motif Atlas
- Homologous match to HL_4V88_191
- Geometric discrepancy: 0.5701
- The information below is about HL_4V88_191
- Detailed Annotation
- T-loop with 1 bulged base
- Broad Annotation
- T-loop
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
3JAI|1|9|G|288
3JAI|1|9|G|289
3JAI|1|9|U|290
3JAI|1|9|G|291
3JAI|1|9|A|292
3JAI|1|9|C|293
3JAI|1|9|U|294
3JAI|1|9|C|295
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain EE
- eS4
- Chain GG
- eS6
- Chain LL
- uS17
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