HL_3JAI_113

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GUUAAUUC

Length

8 nucleotides

Bulged bases

3JAI|1|9|U|1371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JAI_113 not in the Motif Atlas

Homologous match to HL_4V88_215

Geometric discrepancy: 0.11

The information below is about HL_4V88_215

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

3JAI|1|9|G|1366
3JAI|1|9|U|1367
3JAI|1|9|U|1368
3JAI|1|9|A|1369
3JAI|1|9|A|1370
3JAI|1|9|U|1371
3JAI|1|9|U|1372
3JAI|1|9|C|1373

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain RR

eS17