HL_3JAN_025
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GCCGCGCC
- Length
- 8 nucleotides
- Bulged bases
- 3JAN|1|5|C|1485
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JAN_025 not in the Motif Atlas
- Geometric match to HL_2ZNI_001
- Geometric discrepancy: 0.2739
- The information below is about HL_2ZNI_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
3JAN|1|5|G|1479
3JAN|1|5|C|1480
3JAN|1|5|C|1481
3JAN|1|5|G|1482
3JAN|1|5|C|1483
3JAN|1|5|G|1484
3JAN|1|5|C|1485
3JAN|1|5|C|1486
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain L
- Ribosomal protein eL13
- Chain i
- Ribosomal protein eL36
Coloring options: