HL_3JAN_101
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- UAUUUUGUUGGUUUUCG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JAN_101 not in the Motif Atlas
- Geometric match to HL_6UFM_001
- Geometric discrepancy: 0.372
- The information below is about HL_6UFM_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_04642.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
3JAN|1|S2|U|885
3JAN|1|S2|A|886
3JAN|1|S2|U|887
3JAN|1|S2|U|888
3JAN|1|S2|U|889
3JAN|1|S2|U|890
3JAN|1|S2|G|891
3JAN|1|S2|U|892
3JAN|1|S2|U|893
3JAN|1|S2|G|894
3JAN|1|S2|G|895
3JAN|1|S2|U|896
3JAN|1|S2|U|897
3JAN|1|S2|U|898
3JAN|1|S2|U|899
3JAN|1|S2|C|900
3JAN|1|S2|G|901
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SL
- Ribosomal protein uS17
Coloring options: