HL_3JBN_064
3D structure
- PDB id
- 3JBN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GGAUGCUC
- Length
- 8 nucleotides
- Bulged bases
- 3JBN|1|AA|C|1281, 3JBN|1|AA|U|1282
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JBN_064 not in the Motif Atlas
- Homologous match to HL_8C3A_026
- Geometric discrepancy: 0.1967
- The information below is about HL_8C3A_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_44398.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
3JBN|1|AA|G|1276
3JBN|1|AA|G|1277
3JBN|1|AA|A|1278
3JBN|1|AA|U|1279
3JBN|1|AA|G|1280
3JBN|1|AA|C|1281
3JBN|1|AA|U|1282
3JBN|1|AA|C|1283
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain A5
- 60S ribosomal protein uL30
- Chain A8
- 60S ribosomal protein eL32
- Chain A9
- 60S ribosomal protein eL33
- Chain AB
- 5S ribosomal RNA; 5S rRNA
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