HL_3JBP_098
3D structure
- PDB id
- 3JBP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.7 Å
Loop
- Sequence
- UUCAGAACA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JBP_098 not in the Motif Atlas
- Homologous match to HL_8C3A_059
- Geometric discrepancy: 0.1908
- The information below is about HL_8C3A_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
3JBP|1|AA|U|3063
3JBP|1|AA|U|3064
3JBP|1|AA|C|3065
3JBP|1|AA|A|3066
3JBP|1|AA|G|3067
3JBP|1|AA|A|3068
3JBP|1|AA|A|3069
3JBP|1|AA|C|3070
3JBP|1|AA|A|3071
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain A4
- 60S ribosomal protein eL29
- Chain AO
- 60S ribosomal protein uL15
- Chain AS
- 60S ribosomal protein eL18
- Chain AV
- 60S ribosomal protein eL21
- Chain Ai
- 60S ribosomal protein eL44
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