HL_3JBU_054
3D structure
- PDB id
- 3JBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- UGGGUAACACUA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JBU_054 not in the Motif Atlas
- Geometric match to HL_2Y9H_003
- Geometric discrepancy: 0.1774
- The information below is about HL_2Y9H_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
3JBU|1|b|U|710
3JBU|1|b|G|711
3JBU|1|b|G|712
3JBU|1|b|G|713
3JBU|1|b|U|714
3JBU|1|b|A|715
3JBU|1|b|A|716
3JBU|1|b|C|717
3JBU|1|b|A|718
3JBU|1|b|C|719
3JBU|1|b|U|720
3JBU|1|b|A|721
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain O
- 30S ribosomal protein S15
- Chain c
- 50S ribosomal protein L2
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