HL_3JBU_056
3D structure
- PDB id
- 3JBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- UGAAAGG
- Length
- 7 nucleotides
- Bulged bases
- 3JBU|1|b|A|781, 3JBU|1|b|G|784
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JBU_056 not in the Motif Atlas
- Homologous match to HL_9DFE_022
- Geometric discrepancy: 0.2813
- The information below is about HL_9DFE_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87954.2
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 7
Unit IDs
3JBU|1|b|U|779
3JBU|1|b|G|780
3JBU|1|b|A|781
3JBU|1|b|A|782
3JBU|1|b|A|783
3JBU|1|b|G|784
3JBU|1|b|G|785
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain c
- 50S ribosomal protein L2
Coloring options: