HL_3JBU_100
3D structure
- PDB id
- 3JBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- UUGAAGACGACGA
- Length
- 13 nucleotides
- Bulged bases
- 3JBU|1|b|A|2820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JBU_100 not in the Motif Atlas
- Geometric match to HL_8KAH_003
- Geometric discrepancy: 0.3541
- The information below is about HL_8KAH_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89457.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
3JBU|1|b|U|2817
3JBU|1|b|U|2818
3JBU|1|b|G|2819
3JBU|1|b|A|2820
3JBU|1|b|A|2821
3JBU|1|b|G|2822
3JBU|1|b|A|2823
3JBU|1|b|C|2824
3JBU|1|b|G|2825
3JBU|1|b|A|2826
3JBU|1|b|C|2827
3JBU|1|b|G|2828
3JBU|1|b|A|2829
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L32
- Chain d
- 50S ribosomal protein L3
- Chain n
- 50S ribosomal protein L17
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