HL_3JBU_103
3D structure
- PDB id
- 3JBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- GUCAUGCCGUGUC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JBU_103 not in the Motif Atlas
- Homologous match to HL_4WT8_136
- Geometric discrepancy: 0.421
- The information below is about HL_4WT8_136
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06285.3
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
3JBU|1|v|G|29
3JBU|1|v|U|30
3JBU|1|v|C|31
3JBU|1|v|A|32
3JBU|1|v|U|33
3JBU|1|v|G|34
3JBU|1|v|C|35
3JBU|1|v|C|36
3JBU|1|v|G|37
3JBU|1|v|U|38
3JBU|1|v|G|39
3JBU|1|v|U|40
3JBU|1|v|C|41
Current chains
- Chain v
- glycine-tRNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain I
- 30S ribosomal protein S9
- Chain M
- 30S ribosomal protein S13
- Chain X
- mRNA
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