HL_3JBV_058
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- GGAAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JBV_058 not in the Motif Atlas
- Homologous match to HL_5J7L_152
- Geometric discrepancy: 0.2058
- The information below is about HL_5J7L_152
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
3JBV|1|b|G|629
3JBV|1|b|G|630
3JBV|1|b|A|631
3JBV|1|b|A|632
3JBV|1|b|A|633
3JBV|1|b|C|634
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain 7
- 50S ribosomal protein L35
- Chain l
- 50S ribosomal protein L15
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