HL_3JBV_065
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- UGCUAACG
- Length
- 8 nucleotides
- Bulged bases
- 3JBV|1|b|U|958, 3JBV|1|b|C|961
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JBV_065 not in the Motif Atlas
- Homologous match to HL_4WF9_027
- Geometric discrepancy: 0.1884
- The information below is about HL_4WF9_027
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.3
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 397
Unit IDs
3JBV|1|b|U|955
3JBV|1|b|G|956
3JBV|1|b|C|957
3JBV|1|b|U|958
3JBV|1|b|A|959
3JBV|1|b|A|960
3JBV|1|b|C|961
3JBV|1|b|G|962
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain a
- 5S ribosomal RNA; 5S rRNA
- Chain m
- 50S ribosomal protein L16
Coloring options: